waddington

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Here are 3 public repositories matching this topic...

MufanQiu / Chreode

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Chreode: A Cell World Model for One-Step Temporal Dynamics and Perturbation Prediction (arXiv:2605.28111)

scrna-seq single-cell generative-models waddington foundation-model world-model perturbation-prediction

Updated Sep 6, 2026
Python

varchasvee108 / cell-fate-trajectories

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Modeling cell differentiation as continuous developmental flow through pseudotime instead of static clusters. Inspired by Waddington’s epigenetic landscape with interactive trajectory, branching, and uncertainty visualizations.

bioinformatics transformers computational-biology scrna-seq dynamical-systems developmental-biology trajectory-prediction single-cell-rna-seq waddington pseudotime trajectory-sequences waddington-landscape

Updated May 11, 2026
Python

theCrab / waddingtontaxis

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The Waddington Taxis website

app taxis waddington

Updated Mar 28, 2018
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