Pipeline for generating RNAseq-based cancer patient reports
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Updated
Aug 20, 2026 - R
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rnaseq-report
Here are 3 public repositories matching this topic...
Single cell RNA seq (scRNA) analysis pipeline through CellTypist and Scanpy. The workflow includes loading data, data preprocessing, selection of highly variable gene, clustering, principal component analysis (PCA), UMAP visualization, heatmaps, and automated cell type annotation.
python data-science rna-seq biology data-visualization datascience dataset data-analytics data-analysis biological-data-analysis single-cell cancer-data rnaseq-pipeline rnaseq-analysis rnaseq-report rnaseq-data
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Aug 9, 2026 - Jupyter Notebook
🧬 Dashboard for exploring reports from RNAsum, a comprehensive pipeline for analysis WGS and WTS-based cancer patient profiles
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Mar 13, 2026 - TypeScript
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