sort-seq-analysis

Sort-Seq Analysis — a Platforma block that scores protein variants from a sort-seq (FACS bin) experiment. Per condition it emits the read-weighted mean of the gate ranks each variant sorted into (pl7.app/facsBin/gateRankMean) and that value minus the parent's (pl7.app/facsBin/binScore).

Specification

docs/text/work/projects/sequence-repertoires/facs-bin-analysis/ in the docs/text repo.

• README.md — the front door: what the block is for and what always holds.
• implementation.md — the implementer's door: the decisions and why each is held.
• work/atoms/ — the spec source. Never hand-edit the two rendered docs above.

Cross-block contracts this block honours rather than decides live in the umbrella spec, docs/text/work/projects/sequence-repertoires/dms-analysis/.

Layout

Path	What
model/	BlockModelV3 — args projection, outputs, sections
workflow/	Tengo template — resolves inputs, invokes the computation, builds the output columns
ui/	Vue 3 UI — settings drawer and result views
software/	Python package holding the score computation
block/	Published facade — block meta and components
test/	Integration tests against a running backend

Build

pnpm install
pnpm build:dev-local     # local software paths; there is no plain `build` script

The layout is owned by block-tools structure. To take an SDK upgrade, run pnpm upgrade-sdk — do not hand-edit tsconfigs, turbo config, lint config or the catalog.