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@pathology-data-mining

pathology-data-mining

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  1. Mussel Mussel Public

    Computational pathology toolkit: tiling, feature extraction, and annotation for whole-slide images using foundation models

    Python 8

  2. mussel-nf mussel-nf Public

    Nextflow pipeline for WSI tessellation and deep learning feature extraction using Mussel

    Python

  3. paladin-embeddings paladin-embeddings Public

    HTML

  4. cate-sim cate-sim Public

    Python

  5. hover_next_inference hover_next_inference Public

    Inference code for HoVer-NeXt

    Python

  6. mosaic mosaic Public

    H&E Whole Slide Image Cancer Subtype and Biomarker Inference

    Python

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