The Kreshuk group develops machine learning-based methods and tools for automatic segmentation, classification and analysis of biological images.
kreshuklab
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EMBL-Deep-Learning-course-2023-
EMBL-Deep-Learning-course-2023- PublicEMBL Deep Learning course 2023 exercises and materials
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Showing 10 of 49 repositories
- model_ranking Public
- zoocell_seg_ws_2026 Public
A repository containing a pipeline for teaching fine-tuning pipeline of 3D-EM segmentation models. Used in the ZooCell meeting at Naples, April 2026.
- plant-seg Public
PlantSeg is now PanSeg! Please head over to the new repo! This is an archive of the old version.
- no_tiling_artifacts Public
Experiments related to finding the source of tiling artifacts in the segmentation pipelines based on the sliding window inference
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