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1. regtools regtools Public

   Integrate DNA-seq and RNA-seq data to identify mutations that are associated with regulatory effects on gene expression.

   C++ 140 30

2. GenVisR GenVisR Public

   Genome data visualizations

   R 226 65

3. pVACtools pVACtools Public

   Python 182 81

4. VAtools VAtools Public

   A set of tools to annotate VCF files with expression and readcount data

   Python 31 13

5. rnabio.org rnabio.org Public

   website for the rnaseq course

   SCSS 125 45

6. civic-v2 civic-v2 Public

   CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer

   TypeScript 31 7