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alvarolva/README.md

From biological questions to reproducible workflows 🧬

I’m Álvaro, a computational biologist combining experimental biology and bioinformatics to study complex biological systems.

Selected work

🦠 SIAV-VariantFlow — intrahost evolution of swine influenza A virus

🧬 Equine Uterine Microbiome — DNA/RNA 16S microbiome analysis

📊 Bovine Oviduct Single-Cell Atlas — interactive scRNA-seq exploration (repository coming with publication)

viral genomics · microbiome · single-cell · reproducible research

Popular repositories Loading

  1. SIAV-VariantFlow SIAV-VariantFlow Public

    Reproducible workflow for low-frequency intrahost variant analysis of swine influenza A virus from Illumina sequencing data.

    Shell

  2. equine-uterine-microbiome equine-uterine-microbiome Public

    QIIME2 workflow for DNA- and RNA-based 16S rRNA analysis of the low-biomass equine uterine microbiome.

    Shell

  3. alvarolva alvarolva Public

  4. bovine-oviduct-scRNAseq bovine-oviduct-scRNAseq Public

    Reproducible single-cell RNA-seq workflow for cell-type characterization and epithelial subclustering of the bovine oviduct.