Code repository for "Robust single-cell discovery of RNA targets of RNA binding proteins and ribosome"
- bulk_rnaseq: Notebooks containing analysis for bulk STAMP data
- environments: text files containing software/versions for the kernels used to run analysis notebooks
- figures: Notebooks for figure generation
- nanopore: Notebooks containing analysis for nanopore STAMP data
- python_scripts: Python scripts used generally for analysis of STAMP data
- single_cell: Notebooks containing analysis for single cell STAMP data