Rectify: Orphaned AutoSkillit Daemons

[Trecek]

Summary

Issue #4544 has two distinct lifecycle obligations, and both are delivered:

1. On the graceful path, MCP stdio EOF lets the server process exit without a reaper.
2. On the crash path, a surviving registered-stdio AutoSkillit process is discoverable and reapable only when its logical client owner is affirmatively dead.

Implementation Plan

Plan file: /home/talon/projects/generic_automation_mcp/.autoskillit/temp/rectify/rectify_orphaned_autoskillit_daemons_2026-08-12_163820.md

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