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Merge branch 'make-iterative-tree-starting-tree' R-CMD-check.yaml #36: Commit c06a503 pushed by SamT123
20m 15s master
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Vectorise get_consensus R-CMD-check.yaml #35: Commit bfd6369 pushed by SamT123
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Add make_iqtree_tree and make_iterative_tree R-CMD-check.yaml #34: Commit 74b595a pushed by SamT123
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namespaces R-CMD-check.yaml #33: Commit d6201ed pushed by SamT123
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Add extract_orfs R-CMD-check.yaml #32: Commit 0bc8c2f pushed by SamT123
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update read_genbank R-CMD-check.yaml #31: Commit 32945a5 pushed by SamT123
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add overwrite option to make_cmaple_tree R-CMD-check.yaml #30: Commit d139b94 pushed by SamT123
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Add genbank reference sequences R-CMD-check.yaml #29: Commit 663db55 pushed by SamT123
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R-CMD-check.yaml R-CMD-check.yaml #28: by SamT123
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rename M -> MP R-CMD-check.yaml #27: Commit 0ea4661 pushed by SamT123
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Fix final line warning R-CMD-check.yaml #26: Commit 92d9934 pushed by SamT123
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Add genbank reference sequences R-CMD-check.yaml #25: Commit 5e79043 pushed by SamT123
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optionally allow empty sequence_2 in get_substitutions R-CMD-check.yaml #24: Commit 929951b pushed by SamT123
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keep multifurcations when rooting R-CMD-check.yaml #23: Commit 00b9496 pushed by SamT123
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export root tree function R-CMD-check.yaml #22: Commit 5c5f5fc pushed by SamT123
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Docs R-CMD-check.yaml #21: Commit 43b4a40 pushed by SamT123
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Add some more epitope position lists R-CMD-check.yaml #20: Commit b836cf5 pushed by SamT123
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Add root_tree_using_outsequence R-CMD-check.yaml #19: Commit 0383e20 pushed by SamT123
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Preserve names in get_substitutions R-CMD-check.yaml #18: Commit eb26d40 pushed by SamT123
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Update make_cmaple_tree docs R-CMD-check.yaml #17: Commit 17ead50 pushed by SamT123
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Add seed argument to make_cample_tree R-CMD-check.yaml #16: Commit 7f24187 pushed by SamT123
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--help for cmaple R-CMD-check.yaml #15: Commit c2e5c8b pushed by SamT123
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--version, not command R-CMD-check.yaml #14: Commit 7ead17b pushed by SamT123
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fix R CMD CHECK warning R-CMD-check.yaml #13: Commit 12c6678 pushed by SamT123
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change how to check for executables R-CMD-check.yaml #12: Commit 2802396 pushed by SamT123
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