synonyms

PeerJ Elasticsearch/Solr Synonyms

PLOS Synonyms

• URL: https://github.com/PLOS/plos-thesaurus
• License: CC-BY 2.5

MeSH

• URL: http://www.nlm.nih.gov/mesh/termscon.html
• License: U.S. National Library of Medicine must be identified as the creator, maintainer, and provider of the data;

Current PeerJ Usage:

• Synonyms:

  • Run: https://github.com/PeerJ/synonym/blob/master/plos-thesaurus/extract-to-solr.sh
  • Concat with: https://github.com/PeerJ/synonym/blob/master/peerj/synonyms.txt
  • Deploy to ES servers & re-index

• MeSH Data:

  • NOTE: current process assumes that ` is not present in the dataset exported. Should be checked prior to running or alternatively, look at the php script
  • Run: https://github.com/PeerJ/synonym/blob/master/mesh/desc-to-db.sh
  • Import sql file into db (If updating, will need to remove old data)
  • Reindex es mesh index