This is the code accompanying the paper Neuro-foundation models as a critical step toward building generalizable models of the neural code (Bashivan et al., Nature Neuroscience, in press).
costs_analysis/— closed-form cost model for four neuro-foundation-model data strategies (reproduces Box 7). See its README for setup, demo, and expected run time.diversity_analysis/— PubMed + LLM pipeline quantifying paradigm concentration across neuroscience subfields (reproduces Box 9 / Fig. S1). See its README for setup, a no-GPU quick demo, and expected run time.
Released under CC BY 4.0 — see LICENSE.
Bashivan, P., Bakhtiari, S., Bellec, L., et al. "Neuro-foundation models as a critical step toward building generalizable models of the neural code.".