Baranzini Lab UCSF
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Repositories
- biorouter Public
Foundational AI Platform for Biomedical Research Allowing Agents built by the Community
- UnifiedPublicDatabaseLookupAgent Public
MCP router for provenance-first public database lookups across biomedical, chemistry, materials, literature, regulatory, patent, and scientific data APIs.
- RowanMolecularModelingAgent Public
MCP adapter for Rowan-style cloud molecular modeling: conformers, pKa, docking, analogue docking, cofolding, and medicinal chemistry calculation provenance.
- TamarindBioAgent Public
MCP adapter for Tamarind Bio-style cloud protein, structure, docking, and design workflows with guarded API calls and result provenance.
- ScientificWebResearchAgent Public
MCP adapter for scientific web and deep-research workflows, web search APIs, source fetching, and provenance capture beyond scholarly APIs.
- StructuredPaperSearchAgent Public
MCP adapter for structured paper and full-text metadata search across scholarly APIs, section-aware evidence extraction, and provenance-first literature queries.
- AdaptyvBioFoundryAgent Public
MCP adapter for Adaptyv-style protein engineering design-build-test workflows, sequence libraries, experiment metadata, and result retrieval with guarded API calls.
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