We could allow speeding up the protein quantification with GPU at: https://github.com/scOpenLab/MACSimaXenium/blob/5692d3cbef6f2007003d4b1cdfdf1ecf67344539/src/xenium_macsima_core_registration/xenium_macsima_core_registration.py#L367 We would need to add `cupy ` as an optional dependency. See: - https://harpy.readthedocs.io/en/latest/generated/harpy.tb.allocate_intensity.html#harpy-tb-allocate-intensity - https://cupy.dev/
We could allow speeding up the protein quantification with GPU at:
MACSimaXenium/src/xenium_macsima_core_registration/xenium_macsima_core_registration.py
Line 367 in 5692d3c
We would need to add
cupyas an optional dependency. See: