metadata.csv

"organism","authors","collection_date","bioproject","sequence_name","gb-sample_name","gb-fasta_definition_line_modifiers","gb-title","gb-publication_status","gb-publication_title","gs-sample_name","gs-covv_type","gs-covv_passage","gs-covv_location","gs-covv_host","gs-covv_sampling_strategy","gs-covv_sex","gs-covv_patient_age","gs-covv_patient_status","gs-covv_specimen","gs-covv_seq_technology","gs-covv_assembly_method","gs-covv_coverage","gs-covv_orig_lab","gs-covv_orig_lab_addr","gs-covv_subm_lab","gs-covv_subm_lab_addr","gs-covv_subm_sample_id","gs-covv_comment","gs-comment_type","src-Host","src-Isolate","src-geo_loc_name","src-Note","bs-sample_name","bs-sample_title","bs-strain","bs-isolate","bs-collected_by","bs-geo_loc_name","bs-host","bs-host_disease","bs-isolation_source","bs-lat_lon","bs-host_age","bs-passage_history","bs-purpose_of_sequencing","bs-title","sra-sample_name","sra-file_location","sra-file_1","sra-library_name","sra-library_strategy","sra-library_source","sra-library_selection","sra-library_layout","sra-instrument_model","sra-title","cmt-StructuredCommentPrefix","cmt-Assembly Method","cmt-Sequencing Technology","cmt-StructuredCommentSuffix"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-06","PRJNA1308028","85037-1400-B8","85037-1400-B8","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-9011226/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","2","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7128.309484846502","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-B8","","","Human","HRSV/Human/A/USA/PA-CDC-9011226/2025","USA:Pennsylvania","Original","85037-1400-B8","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-9011226/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-B8_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-B8.fastq.gz","85037-1400-B8","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-02","PRJNA1308028","85037-1400-E9","85037-1400-E9","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-8366170/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","Unknown","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","6967.991032270734","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-E9","","","Human","HRSV/Human/A/USA/PA-CDC-8366170/2025","USA:Pennsylvania","Original","85037-1400-E9","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-8366170/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","Unknown","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-E9_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-E9.fastq.gz","85037-1400-E9","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-08","PRJNA1308028","85037-1400-F3","85037-1400-F3","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/TX-CDC-6852728/2025","not applicable","Original","North America/USA/Texas","Human","Baseline Surveillence","Unknown","1","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8379.262517180443","NVSN Houston 5","Texas Children’s Hospital, 1102 Bates Ave, Houston, Texas, USA 77030","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-F3","","","Human","HRSV/Human/B/USA/TX-CDC-6852728/2025","USA:Texas","Original","85037-1400-F3","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/TX-CDC-6852728/2025","NVSN Houston 5","USA:Texas","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","1","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-F3_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-F3.fastq.gz","85037-1400-F3","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-16","PRJNA1308028","85037-1400-E6","85037-1400-E6","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/OH-CDC-9011213/2025","not applicable","Original","North America/USA/Ohio","Human","Baseline Surveillence","Unknown","2","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","3338.2686391307193","NVSN Cincinnati 3","Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, Ohio, USA 45229","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-E6","","","Human","HRSV/Human/A/USA/OH-CDC-9011213/2025","USA:Ohio","Original","85037-1400-E6","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/OH-CDC-9011213/2025","NVSN Cincinnati 3","USA:Ohio","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-E6_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-E6.fastq.gz","85037-1400-E6","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-12","PRJNA1308028","85037-1400-B2","85037-1400-B2","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/TN-CDC-6852716/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","2","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","562.5614161376873","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-B2","","","Human","HRSV/Human/B/USA/TN-CDC-6852716/2025","USA:Tennessee","Original","85037-1400-B2","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/TN-CDC-6852716/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-B2_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-B2.fastq.gz","85037-1400-B2","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2024-08-22","PRJNA1308028","85037-1400-B5","85037-1400-B5","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TX-CDC-5988442/2024","not applicable","Original","North America/USA/Texas","Human","Baseline Surveillence","Unknown","4","Unknown","Unknown","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","3697.53674978729","NVSN Houston 5","Texas Children’s Hospital, 1102 Bates Ave, Houston, Texas, USA 77030","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-B5","","","Human","HRSV/Human/A/USA/TX-CDC-5988442/2024","USA:Texas","Original","85037-1400-B5","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TX-CDC-5988442/2024","NVSN Houston 5","USA:Texas","Human","Respiratory syncytial virus","Unknown","N/A","4","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-B5_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-B5.fastq.gz","85037-1400-B5","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-20","PRJNA1308028","85037-1400-D4","85037-1400-D4","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/TX-CDC-6852734/2025","not applicable","Original","North America/USA/Texas","Human","Baseline Surveillence","Unknown","0","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","2359.3417953415337","NVSN Houston 5","Texas Children’s Hospital, 1102 Bates Ave, Houston, Texas, USA 77030","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-D4","","","Human","HRSV/Human/B/USA/TX-CDC-6852734/2025","USA:Texas","Original","85037-1400-D4","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/TX-CDC-6852734/2025","NVSN Houston 5","USA:Texas","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","0","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-D4_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-D4.fastq.gz","85037-1400-D4","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-10","PRJNA1308028","85037-1400-H6","85037-1400-H6","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/OH-CDC-9011216/2025","not applicable","Original","North America/USA/Ohio","Human","Baseline Surveillence","Unknown","7","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","9055.170059566668","NVSN Cincinnati 3","Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, Ohio, USA 45229","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-H6","","","Human","HRSV/Human/A/USA/OH-CDC-9011216/2025","USA:Ohio","Original","85037-1400-H6","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/OH-CDC-9011216/2025","NVSN Cincinnati 3","USA:Ohio","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","7","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-H6_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-H6.fastq.gz","85037-1400-H6","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-13","PRJNA1308028","85037-1400-H9","85037-1400-H9","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-8366202/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","Unknown","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7820.722065850625","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-H9","","","Human","HRSV/Human/A/USA/PA-CDC-8366202/2025","USA:Pennsylvania","Original","85037-1400-H9","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-8366202/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","Unknown","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-H9_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-H9.fastq.gz","85037-1400-H9","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-13","PRJNA1308028","85037-1400-G1","85037-1400-G1","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TN-CDC-6852713/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","1","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","5041.567089933237","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-G1","","","Human","HRSV/Human/A/USA/TN-CDC-6852713/2025","USA:Tennessee","Original","85037-1400-G1","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TN-CDC-6852713/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","1","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-G1_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-G1.fastq.gz","85037-1400-G1","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-07","PRJNA1308028","85037-1400-C8","85037-1400-C8","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-9011227/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","2","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","5933.035740001309","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-C8","","","Human","HRSV/Human/A/USA/PA-CDC-9011227/2025","USA:Pennsylvania","Original","85037-1400-C8","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-9011227/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-C8_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-C8.fastq.gz","85037-1400-C8","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-11","PRJNA1308028","85037-1400-D2","85037-1400-D2","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TN-CDC-6852718/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","0","Unknown","Nasopharyngeal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7592.845660426758","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-D2","","","Human","HRSV/Human/A/USA/TN-CDC-6852718/2025","USA:Tennessee","Original","85037-1400-D2","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TN-CDC-6852718/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Nasopharyngeal swab","N/A","0","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-D2_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-D2.fastq.gz","85037-1400-D2","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-05-04","PRJNA1308028","85037-1400-H7","85037-1400-H7","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-9011224/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","2","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7469.574878910852","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-H7","","","Human","HRSV/Human/A/USA/PA-CDC-9011224/2025","USA:Pennsylvania","Original","85037-1400-H7","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-9011224/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-H7_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-H7.fastq.gz","85037-1400-H7","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-22","PRJNA1308028","85037-1400-E8","85037-1400-E8","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-9011229/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","2","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","6976.539307455652","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-E8","","","Human","HRSV/Human/A/USA/PA-CDC-9011229/2025","USA:Pennsylvania","Original","85037-1400-E8","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-9011229/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-E8_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-E8.fastq.gz","85037-1400-E8","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-11","PRJNA1308028","85037-1400-E4","85037-1400-E4","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/NY-CDC-5988431/2025","not applicable","Original","North America/USA/New York","Human","Baseline Surveillence","Unknown","1","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7694.928655583191","NVSN Rochester 2","University of Rochester School of Medicine and Dentistry, 601 Elmwood Ave, Rochester, New York, USA 14642","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-E4","","","Human","HRSV/Human/A/USA/NY-CDC-5988431/2025","USA:New York","Original","85037-1400-E4","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/NY-CDC-5988431/2025","NVSN Rochester 2","USA:New York","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","1","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-E4_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-E4.fastq.gz","85037-1400-E4","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-31","PRJNA1308028","85037-1400-D9","85037-1400-D9","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/PA-CDC-8366169/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","Unknown","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8443.753714248314","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-D9","","","Human","HRSV/Human/B/USA/PA-CDC-8366169/2025","USA:Pennsylvania","Original","85037-1400-D9","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/PA-CDC-8366169/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","Unknown","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-D9_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-D9.fastq.gz","85037-1400-D9","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-20","PRJNA1308028","85037-1400-B10","85037-1400-B10","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-8366225/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","Unknown","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","1334.7432742030503","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-B10","","","Human","HRSV/Human/A/USA/PA-CDC-8366225/2025","USA:Pennsylvania","Original","85037-1400-B10","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-8366225/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","Unknown","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-B10_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-B10.fastq.gz","85037-1400-B10","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-04","PRJNA1308028","85037-1400-A9","85037-1400-A9","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-9011233/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","1","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7287.44979709386","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-A9","","","Human","HRSV/Human/A/USA/PA-CDC-9011233/2025","USA:Pennsylvania","Original","85037-1400-A9","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-9011233/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","1","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-A9_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-A9.fastq.gz","85037-1400-A9","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-29","PRJNA1308028","85037-1400-G7","85037-1400-G7","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-9011223/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","2","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","6674.05426102893","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-G7","","","Human","HRSV/Human/A/USA/PA-CDC-9011223/2025","USA:Pennsylvania","Original","85037-1400-G7","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-9011223/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-G7_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-G7.fastq.gz","85037-1400-G7","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-05-12","PRJNA1308028","85037-1400-A7","85037-1400-A7","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/PA-CDC-9011217/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","0","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","638.5633056337107","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-A7","","","Human","HRSV/Human/B/USA/PA-CDC-9011217/2025","USA:Pennsylvania","Original","85037-1400-A7","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/PA-CDC-9011217/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","0","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-A7_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-A7.fastq.gz","85037-1400-A7","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2024-07-21","PRJNA1308028","85037-1400-F5","85037-1400-F5","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TX-CDC-5988446/2024","not applicable","Original","North America/USA/Texas","Human","Baseline Surveillence","Unknown","2","Unknown","Unknown","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","3561.546727748691","NVSN Houston 5","Texas Children’s Hospital, 1102 Bates Ave, Houston, Texas, USA 77030","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-F5","","","Human","HRSV/Human/A/USA/TX-CDC-5988446/2024","USA:Texas","Original","85037-1400-F5","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TX-CDC-5988446/2024","NVSN Houston 5","USA:Texas","Human","Respiratory syncytial virus","Unknown","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-F5_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-F5.fastq.gz","85037-1400-F5","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-02-27","PRJNA1308028","85037-1400-F4","85037-1400-F4","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/NY-CDC-5988432/2025","not applicable","Original","North America/USA/New York","Human","Baseline Surveillence","Unknown","1","Unknown","Nasopharyngeal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","704.597133132609","NVSN Rochester 2","University of Rochester School of Medicine and Dentistry, 601 Elmwood Ave, Rochester, New York, USA 14642","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-F4","","","Human","HRSV/Human/A/USA/NY-CDC-5988432/2025","USA:New York","Original","85037-1400-F4","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/NY-CDC-5988432/2025","NVSN Rochester 2","USA:New York","Human","Respiratory syncytial virus","Nasopharyngeal swab","N/A","1","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-F4_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-F4.fastq.gz","85037-1400-F4","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-10","PRJNA1308028","85037-1400-B1","85037-1400-B1","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TN-CDC-6852707/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","2","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","1426.8268097918576","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-B1","","","Human","HRSV/Human/A/USA/TN-CDC-6852707/2025","USA:Tennessee","Original","85037-1400-B1","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TN-CDC-6852707/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-B1_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-B1.fastq.gz","85037-1400-B1","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2024-07-31","PRJNA1308028","85037-1400-D5","85037-1400-D5","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/TX-CDC-5988444/2024","not applicable","Original","North America/USA/Texas","Human","Baseline Surveillence","Unknown","0","Unknown","Unknown","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8644.470715267325","NVSN Houston 5","Texas Children’s Hospital, 1102 Bates Ave, Houston, Texas, USA 77030","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-D5","","","Human","HRSV/Human/B/USA/TX-CDC-5988444/2024","USA:Texas","Original","85037-1400-D5","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/TX-CDC-5988444/2024","NVSN Houston 5","USA:Texas","Human","Respiratory syncytial virus","Unknown","N/A","0","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-D5_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-D5.fastq.gz","85037-1400-D5","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-02","PRJNA1308028","85037-1400-B7","85037-1400-B7","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/OH-CDC-9011218/2025","not applicable","Original","North America/USA/Ohio","Human","Baseline Surveillence","Unknown","0","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","6588.113865271419","NVSN Cincinnati 3","Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, Ohio, USA 45229","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-B7","","","Human","HRSV/Human/B/USA/OH-CDC-9011218/2025","USA:Ohio","Original","85037-1400-B7","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/OH-CDC-9011218/2025","NVSN Cincinnati 3","USA:Ohio","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","0","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-B7_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-B7.fastq.gz","85037-1400-B7","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-12","PRJNA1308028","85037-1400-C2","85037-1400-C2","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/TN-CDC-6852717/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","2","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8319.980694980695","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-C2","","","Human","HRSV/Human/B/USA/TN-CDC-6852717/2025","USA:Tennessee","Original","85037-1400-C2","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/TN-CDC-6852717/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-C2_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-C2.fastq.gz","85037-1400-C2","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-20","PRJNA1308028","85037-1400-E1","85037-1400-E1","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TN-CDC-6852711/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","0","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","6247.353187589999","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-E1","","","Human","HRSV/Human/A/USA/TN-CDC-6852711/2025","USA:Tennessee","Original","85037-1400-E1","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TN-CDC-6852711/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","0","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-E1_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-E1.fastq.gz","85037-1400-E1","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-04","PRJNA1308028","85037-1400-A6","85037-1400-A6","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/OH-CDC-9011209/2025","not applicable","Original","North America/USA/Ohio","Human","Baseline Surveillence","Unknown","3","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","4427.136283301696","NVSN Cincinnati 3","Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, Ohio, USA 45229","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-A6","","","Human","HRSV/Human/A/USA/OH-CDC-9011209/2025","USA:Ohio","Original","85037-1400-A6","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/OH-CDC-9011209/2025","NVSN Cincinnati 3","USA:Ohio","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","3","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-A6_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-A6.fastq.gz","85037-1400-A6","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-13","PRJNA1308028","85037-1400-H1","85037-1400-H1","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TN-CDC-6852714/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","0","Unknown","Nasopharyngeal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7717.806113765791","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-H1","","","Human","HRSV/Human/A/USA/TN-CDC-6852714/2025","USA:Tennessee","Original","85037-1400-H1","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TN-CDC-6852714/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Nasopharyngeal swab","N/A","0","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-H1_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-H1.fastq.gz","85037-1400-H1","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-28","PRJNA1308028","85037-1400-A4","85037-1400-A4","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/TX-CDC-6852731/2025","not applicable","Original","North America/USA/Texas","Human","Baseline Surveillence","Unknown","3","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7489.545186833322","NVSN Houston 5","Texas Children’s Hospital, 1102 Bates Ave, Houston, Texas, USA 77030","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-A4","","","Human","HRSV/Human/B/USA/TX-CDC-6852731/2025","USA:Texas","Original","85037-1400-A4","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/TX-CDC-6852731/2025","NVSN Houston 5","USA:Texas","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","3","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-A4_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-A4.fastq.gz","85037-1400-A4","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-05","PRJNA1308028","85037-1400-E7","85037-1400-E7","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/OH-CDC-9011221/2025","not applicable","Original","North America/USA/Ohio","Human","Baseline Surveillence","Unknown","1","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","528.3918733233004","NVSN Cincinnati 3","Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, Ohio, USA 45229","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-E7","","","Human","HRSV/Human/B/USA/OH-CDC-9011221/2025","USA:Ohio","Original","85037-1400-E7","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/OH-CDC-9011221/2025","NVSN Cincinnati 3","USA:Ohio","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","1","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-E7_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-E7.fastq.gz","85037-1400-E7","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2024-08-18","PRJNA1308028","85037-1400-C5","85037-1400-C5","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/TX-CDC-5988443/2024","not applicable","Original","North America/USA/Texas","Human","Baseline Surveillence","Unknown","0","Unknown","Unknown","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7559.656542514892","NVSN Houston 5","Texas Children’s Hospital, 1102 Bates Ave, Houston, Texas, USA 77030","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-C5","","","Human","HRSV/Human/B/USA/TX-CDC-5988443/2024","USA:Texas","Original","85037-1400-C5","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/TX-CDC-5988443/2024","NVSN Houston 5","USA:Texas","Human","Respiratory syncytial virus","Unknown","N/A","0","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-C5_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-C5.fastq.gz","85037-1400-C5","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-09","PRJNA1308028","85037-1400-E2","85037-1400-E2","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TN-CDC-6852719/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","1","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8338.295261159838","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-E2","","","Human","HRSV/Human/A/USA/TN-CDC-6852719/2025","USA:Tennessee","Original","85037-1400-E2","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TN-CDC-6852719/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","1","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-E2_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-E2.fastq.gz","85037-1400-E2","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-21","PRJNA1308028","85037-1400-A10","85037-1400-A10","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-8366222/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","Unknown","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8172.364796753289","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-A10","","","Human","HRSV/Human/A/USA/PA-CDC-8366222/2025","USA:Pennsylvania","Original","85037-1400-A10","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-8366222/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","Unknown","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-A10_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-A10.fastq.gz","85037-1400-A10","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-21","PRJNA1308028","85037-1400-H8","85037-1400-H8","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-9011232/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","1","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8099.032203167954","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-H8","","","Human","HRSV/Human/A/USA/PA-CDC-9011232/2025","USA:Pennsylvania","Original","85037-1400-H8","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-9011232/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","1","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-H8_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-H8.fastq.gz","85037-1400-H8","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-31","PRJNA1308028","85037-1400-C1","85037-1400-C1","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/TN-CDC-6852709/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","0","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8648.937634971533","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-C1","","","Human","HRSV/Human/B/USA/TN-CDC-6852709/2025","USA:Tennessee","Original","85037-1400-C1","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/TN-CDC-6852709/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","0","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-C1_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-C1.fastq.gz","85037-1400-C1","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-02","PRJNA1308028","85037-1400-D3","85037-1400-D3","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/TN-CDC-6852726/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","2","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8946.396675827771","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-D3","","","Human","HRSV/Human/B/USA/TN-CDC-6852726/2025","USA:Tennessee","Original","85037-1400-D3","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/TN-CDC-6852726/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-D3_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-D3.fastq.gz","85037-1400-D3","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-20","PRJNA1308028","85037-1400-F1","85037-1400-F1","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TN-CDC-6852712/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","0","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8075.2925967140145","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-F1","","","Human","HRSV/Human/A/USA/TN-CDC-6852712/2025","USA:Tennessee","Original","85037-1400-F1","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TN-CDC-6852712/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","0","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-F1_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-F1.fastq.gz","85037-1400-F1","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-07","PRJNA1308028","85037-1400-C6","85037-1400-C6","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/OH-CDC-9011211/2025","not applicable","Original","North America/USA/Ohio","Human","Baseline Surveillence","Unknown","4","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","873.8950710217974","NVSN Cincinnati 3","Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, Ohio, USA 45229","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-C6","","","Human","HRSV/Human/A/USA/OH-CDC-9011211/2025","USA:Ohio","Original","85037-1400-C6","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/OH-CDC-9011211/2025","NVSN Cincinnati 3","USA:Ohio","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","4","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-C6_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-C6.fastq.gz","85037-1400-C6","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-31","PRJNA1308028","85037-1400-C9","85037-1400-C9","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/PA-CDC-8366167/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","Unknown","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7936.04148943132","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-C9","","","Human","HRSV/Human/B/USA/PA-CDC-8366167/2025","USA:Pennsylvania","Original","85037-1400-C9","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/PA-CDC-8366167/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","Unknown","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-C9_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-C9.fastq.gz","85037-1400-C9","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-21","PRJNA1308028","85037-1400-C4","85037-1400-C4","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TX-CDC-6852733/2025","not applicable","Original","North America/USA/Texas","Human","Baseline Surveillence","Unknown","1","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8279.052948491393","NVSN Houston 5","Texas Children’s Hospital, 1102 Bates Ave, Houston, Texas, USA 77030","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-C4","","","Human","HRSV/Human/A/USA/TX-CDC-6852733/2025","USA:Texas","Original","85037-1400-C4","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TX-CDC-6852733/2025","NVSN Houston 5","USA:Texas","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","1","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-C4_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-C4.fastq.gz","85037-1400-C4","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-02-25","PRJNA1308028","85037-1400-G4","85037-1400-G4","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/NY-CDC-5988433/2025","not applicable","Original","North America/USA/New York","Human","Baseline Surveillence","Unknown","2","Unknown","Nasopharyngeal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","2105.779734241016","NVSN Rochester 2","University of Rochester School of Medicine and Dentistry, 601 Elmwood Ave, Rochester, New York, USA 14642","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-G4","","","Human","HRSV/Human/A/USA/NY-CDC-5988433/2025","USA:New York","Original","85037-1400-G4","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/NY-CDC-5988433/2025","NVSN Rochester 2","USA:New York","Human","Respiratory syncytial virus","Nasopharyngeal swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-G4_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-G4.fastq.gz","85037-1400-G4","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-18","PRJNA1308028","85037-1400-D8","85037-1400-D8","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/PA-CDC-9011228/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","2","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7313.652486910994","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-D8","","","Human","HRSV/Human/B/USA/PA-CDC-9011228/2025","USA:Pennsylvania","Original","85037-1400-D8","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/PA-CDC-9011228/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-D8_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-D8.fastq.gz","85037-1400-D8","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-05","PRJNA1308028","85037-1400-B3","85037-1400-B3","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TN-CDC-6852724/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","2","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","420.1301871972771","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-B3","","","Human","HRSV/Human/A/USA/TN-CDC-6852724/2025","USA:Tennessee","Original","85037-1400-B3","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TN-CDC-6852724/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-B3_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-B3.fastq.gz","85037-1400-B3","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-04","PRJNA1308028","85037-1400-D7","85037-1400-D7","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/OH-CDC-9011220/2025","not applicable","Original","North America/USA/Ohio","Human","Baseline Surveillence","Unknown","4","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","265.2450621321125","NVSN Cincinnati 3","Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, Ohio, USA 45229","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-D7","","","Human","HRSV/Human/B/USA/OH-CDC-9011220/2025","USA:Ohio","Original","85037-1400-D7","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/OH-CDC-9011220/2025","NVSN Cincinnati 3","USA:Ohio","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","4","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-D7_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-D7.fastq.gz","85037-1400-D7","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-02-25","PRJNA1308028","85037-1400-H4","85037-1400-H4","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/NY-CDC-5988434/2025","not applicable","Original","North America/USA/New York","Human","Baseline Surveillence","Unknown","2","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","5662.711396216535","NVSN Rochester 2","University of Rochester School of Medicine and Dentistry, 601 Elmwood Ave, Rochester, New York, USA 14642","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-H4","","","Human","HRSV/Human/A/USA/NY-CDC-5988434/2025","USA:New York","Original","85037-1400-H4","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/NY-CDC-5988434/2025","NVSN Rochester 2","USA:New York","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-H4_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-H4.fastq.gz","85037-1400-H4","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-24","PRJNA1308028","85037-1400-B4","85037-1400-B4","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/B/USA/TX-CDC-6852732/2025","not applicable","Original","North America/USA/Texas","Human","Baseline Surveillence","Unknown","2","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","1864.90203520712","NVSN Houston 5","Texas Children’s Hospital, 1102 Bates Ave, Houston, Texas, USA 77030","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-B4","","","Human","HRSV/Human/B/USA/TX-CDC-6852732/2025","USA:Texas","Original","85037-1400-B4","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/B/USA/TX-CDC-6852732/2025","NVSN Houston 5","USA:Texas","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-B4_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-B4.fastq.gz","85037-1400-B4","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-07","PRJNA1308028","85037-1400-F9","85037-1400-F9","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-8366183/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","Unknown","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","9057.23447011848","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-F9","","","Human","HRSV/Human/A/USA/PA-CDC-8366183/2025","USA:Pennsylvania","Original","85037-1400-F9","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-8366183/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","Unknown","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-F9_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-F9.fastq.gz","85037-1400-F9","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2024-07-21","PRJNA1308028","85037-1400-H5","85037-1400-H5","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TX-CDC-5988448/2024","not applicable","Original","North America/USA/Texas","Human","Baseline Surveillence","Unknown","0","Unknown","Unknown","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","7306.230215356418","NVSN Houston 5","Texas Children’s Hospital, 1102 Bates Ave, Houston, Texas, USA 77030","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-H5","","","Human","HRSV/Human/A/USA/TX-CDC-5988448/2024","USA:Texas","Original","85037-1400-H5","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TX-CDC-5988448/2024","NVSN Houston 5","USA:Texas","Human","Respiratory syncytial virus","Unknown","N/A","0","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-H5_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-H5.fastq.gz","85037-1400-H5","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-04-04","PRJNA1308028","85037-1400-H10","85037-1400-H10","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/PA-CDC-8367399/2025","not applicable","Original","North America/USA/Pennsylvania","Human","Baseline Surveillence","Unknown","Unknown","Unknown","Nasal mid-turbinate swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","695.6890299777458","NVSN Pittsburgh 8","UPMC Children's Hospital of Pittsburgh, 4401 Penn Ave, Pittsburgh, Pennsylvania, USA 15224","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-H10","","","Human","HRSV/Human/A/USA/PA-CDC-8367399/2025","USA:Pennsylvania","Original","85037-1400-H10","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/PA-CDC-8367399/2025","NVSN Pittsburgh 8","USA:Pennsylvania","Human","Respiratory syncytial virus","Nasal mid-turbinate swab","N/A","Unknown","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-H10_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-H10.fastq.gz","85037-1400-H10","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2024-07-18","PRJNA1308028","85037-1400-G5","85037-1400-G5","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TX-CDC-5988447/2024","not applicable","Original","North America/USA/Texas","Human","Baseline Surveillence","Unknown","1","Unknown","Unknown","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","8731.101721542187","NVSN Houston 5","Texas Children’s Hospital, 1102 Bates Ave, Houston, Texas, USA 77030","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-G5","","","Human","HRSV/Human/A/USA/TX-CDC-5988447/2024","USA:Texas","Original","85037-1400-G5","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TX-CDC-5988447/2024","NVSN Houston 5","USA:Texas","Human","Respiratory syncytial virus","Unknown","N/A","1","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-G5_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-G5.fastq.gz","85037-1400-G5","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-13","PRJNA1308028","85037-1400-A2","85037-1400-A2","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TN-CDC-6852715/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","3","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","1540.146943317188","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-A2","","","Human","HRSV/Human/A/USA/TN-CDC-6852715/2025","USA:Tennessee","Original","85037-1400-A2","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TN-CDC-6852715/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","3","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-A2_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-A2.fastq.gz","85037-1400-A2","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"
"Respiratory syncytial virus","Susanna Sabin, Anna Kelleher, Xiaoyan Lu, Paula R. Lourenco, Paritra Mandal, Casey Smith, Peter W. Cook, Clinton R. Paden, Lydia Atherton","2025-03-20","PRJNA1308028","85037-1400-D1","85037-1400-D1","","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","unpublished","NVSN 2024-2025 RSV Surveillance","HRSV/A/USA/TN-CDC-6852710/2025","not applicable","Original","North America/USA/Tennessee","Human","Baseline Surveillence","Unknown","2","Unknown","Anterior nasal swab","Illumina","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","5184.868961906009","NVSN Nashville 1","Vanderbilt University Medical Center, 1211 Medical Center Dr, Nashville, Tennessee, USA 37232","Coronavirus Respiratory Viruses Laboratory Branch, Cornaviruses and Other Respiratory Viruses Division, Centers for Disease Control and Prevention","1600 Clifton Road NE, Atlanta, Georgia,USA 30329","85037-1400-D1","","","Human","HRSV/Human/A/USA/TN-CDC-6852710/2025","USA:Tennessee","Original","85037-1400-D1","NVSN 2024-2025 RSV Surveillance","","HRSV/Human/A/USA/TN-CDC-6852710/2025","NVSN Nashville 1","USA:Tennessee","Human","Respiratory syncytial virus","Anterior nasal swab","N/A","2","Original","Baseline Surveillence","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","85037-1400-D1_sra","local","/scicomp/groups-pure/OID/NCIRD/CORVD/CRVLB/MIST/submissions//2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1//raw_reads/85037-1400-D1.fastq.gz","85037-1400-D1","AMPLICON","VIRAL RNA","RT-PCR","paired","NextSeq 500","2025-12-15_4916_251121_VH02136_52_AAHHJ5JM5_1","Assembly-Data","Iterative Refinement Meta-Assembler (IRMA) 1.2.1","Illumina","Assembly-Data"